Read the output of Tecan Plate Readers
plate_read_tecan(file, temp = FALSE)File path to the .xlsx or .csv file.
Logical, whether to include the temperature column.
a tibble::tibble() of the values from the file.
# read a .csv tecan file
fl <- system.file(
'extdata', 'tecanON1.csv',
package = 'wellr'
)
plate_read_tecan(fl)
#> # A tibble: 11,520 × 5
#> cycle_nr time_s well od600 lumi
#> <dbl> <dbl> <chr> <dbl> <dbl>
#> 1 1 0 A01 0.0459 -4
#> 2 1 0 A02 0.0455 -2
#> 3 1 0 A03 0.0456 -5
#> 4 1 0 A04 0.0448 3
#> 5 1 0 A05 0.0444 110
#> 6 1 0 A06 0.0452 6
#> 7 1 0 A07 0.0442 127
#> 8 1 0 A08 0.0454 -2
#> 9 1 0 A09 0.0458 -2
#> 10 1 0 A10 0.046 -3
#> # ℹ 11,510 more rows
# read a .xlsx tecan file
fl <- system.file(
'extdata', 'tecanON1.xlsx',
package = 'wellr'
)
plate_read_tecan(fl)
#> # A tibble: 11,520 × 5
#> cycle_nr time_s well od600 lumi
#> <dbl> <dbl> <chr> <dbl> <dbl>
#> 1 1 0 A01 0.0459 -4
#> 2 1 0 A02 0.0455 -2
#> 3 1 0 A03 0.0456 -5
#> 4 1 0 A04 0.0448 3
#> 5 1 0 A05 0.0444 110
#> 6 1 0 A06 0.0452 6
#> 7 1 0 A07 0.0442 127
#> 8 1 0 A08 0.0454 -2
#> 9 1 0 A09 0.0458 -2
#> 10 1 0 A10 0.0460 -3
#> # ℹ 11,510 more rows