Function reference
Entity
Importing and manipulating different molecular entities
| Molecule | Primary Molecular Nodes class that coordinates the conversion of structural bioinformatic data |
| MoleculeSelector | A helper to create selections for Molecules and AtomArrays. |
| Trajectory | MD trajectory entity for Blender visualization. |
| entities.Ensemble | |
| entities.OXDNA | A class to handle oxDNA trajectory data. |
Trajectory
Working with molecular dynamics trajectories
| Trajectory | MD trajectory entity for Blender visualization. |
| entities.trajectory.SelectionManager | Manages atom selections for a trajectory. |
| entities.StreamingTrajectory | Trajectory subclass for IMD streaming connections. |
Styles
Setting and controlling the different styles
| StyleSpheres | Style class for Style Spheres |
| StyleRibbon | Style class for Style Ribbon |
| StyleCartoon | Style class for Style Cartoon |
| StyleSurface | Style class for Style Surface |
| StyleSticks | Style class for Style Sticks |
| StyleBallAndStick | Style class for Style Ball and Stick |
Materials
Setting and controlling the different materials
| material.AmbientOcclusion | |
| material.Default | |
| material.Squishy | |
| material.FlatOutline | |
| material.TransparentOutline |
Session
Session object to control molecular entities
| session.MNSession |
Annotations
Annotations for molecular entitites
| annotations.base | |
| annotations.interface | |
| annotations.manager | |
| entities.trajectory.annotations | |
| entities.molecule.annotations | |
| entities.density.annotations |
Scene
Control settings for the Blender scene through the Canvas object.
| Canvas | High-level render controller for Blender scenes. |
| scene.camera |